BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D07SP1|AL428375
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1740 0.0
>3x_Contig1766
Length = 23951
Score = 1740 bits (877), Expect = 0.0
Identities = 878/879 (99%)
Strand = Plus / Minus
Query: 1 gatcaccgaagtgatggtggtcggcggatgtgtggtggtcggatcagacgatgattccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15018 gatcaccgaagtgatggtggtcggcggatgtgtggtggtcggatcagacgatgattccac 14959
Query: 61 tgatgtagaagttgtctcctcttcagatgatgttgtggtttcatccagatcgctagaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14958 tgatgtagaagttgtctcctcttcagatgatgttgtggtttcatccagatcgctagaagt 14899
Query: 121 gctggtagaagagcttgtgcttgaactggtagatgatgatgatgtggaagactcggatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14898 gctggtagaagagcttgtgcttgaactggtagatgatgatgatgtggaagactcggatga 14839
Query: 181 agaactgctactactgctagtagtggtgttagaaggaagctcagaactagatgagatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14838 agaactgctactactgctagtagtggtgttagaaggaagctcagaactagatgagatatc 14779
Query: 241 cgttgaaatgaaagacgtcgacacttctgacatcgaagtctcttctggggcttcagacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14778 cgttgaaatgaaagacgtcgacacttctgacatcgaagtctcttctggggcttcagacga 14719
Query: 301 tgaaacaaagggttcctccgtgctacttacttccccatcactcgaactagtaataacggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14718 tgaaacaaagggttcctccgtgctacttacttccccatcactcgaactagtaataacggt 14659
Query: 361 aaacgtcgactgctcttcggaagaagacgccaaagatgaggaaggagatagtgtacttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14658 aaacgtcgactgctcttcggaagaagacgccaaagatgaggaaggagatagtgtacttgt 14599
Query: 421 tgtaccgttgcttgccgttatccctccgtcattttccgccgcagactgctgacccagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14598 tgtaccgttgcttgccgttatccctccgtcattttccgccgcagactgctgacccagaac 14539
Query: 481 tggttttatcgcagagactaataatagcagcggtatcacaaactgcatatttcctcaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14538 tggttttatcgcagagactaataatagcagcggtatcacaaactgcatatttcctcaata 14479
Query: 541 tatcagatcgaaataacaactgttcctcctctctaaaccaaatggaaaaagatgtgccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14478 tatcagatcgaaataacaactgttcctcctctctaaaccaaatggaaaaagatgtgccag 14419
Query: 601 ctaatattcactctgcacaagtgagtcaacctatacagagcaaaaaaaaaggcaacgtac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14418 ctaatattcactctgcacaagtgagtcaacctatacagagcaaaaaaaaaggcaacgtac 14359
Query: 661 aaactacagatcaaagtttaaatctcatgtacttgttaacatgtaacacattttatttat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14358 aaactacagatcaaagtttaaatctcatgtacttgttaacatgtaacacattttatttat 14299
Query: 721 actatatttgatctgaaaatcattcaagcaaaatagatcaaaaggaaaggtgcttcgcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14298 actatatttgatctgaaaatcattcaagcaaaatagatcaaaaggaaaggtgcttcgcca 14239
Query: 781 aaaaaaaaaaaaaaawggaaaattcaaacaataaaaataaaacgtcttttttcgaaaaaa 840
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14238 aaaaaaaaaaaaaaatggaaaattcaaacaataaaaataaaacgtcttttttcgaaaaaa 14179
Query: 841 tccgtctttttctttccagatcatcgtaacggaattgag 879
|||||||||||||||||||||||||||||||||||||||
Sbjct: 14178 tccgtctttttctttccagatcatcgtaacggaattgag 14140
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,496
Number of Sequences: 1807
Number of extensions: 17496
Number of successful extensions: 2509
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)